BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005G01SP1|AL425415
(884 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1729 576 e-164
>3x_Contig1729
Length = 15481
Score = 576 bits (276), Expect = e-164
Identities = 413/466 (88%)
Strand = Plus / Plus
Query: 419 ggcccacagagaagaggaagcaaagcaggcgaagcaggaccagggggccacagagaacgg 478
|||||| |||||||| |||||||||||| |||||||| ||||| | |||| ||||||||
Sbjct: 14825 ggcccatagagaagatgaagcaaagcagtcgaagcagtaccagtgtgccatagagaacgt 14884
Query: 479 gaggaaakgggaagkcaygggacgggagggaacacgggaataggggcgggacanttggga 538
|| |||| || ||| | || ||| || ||||||||||||||||||||||||| ||||||
Sbjct: 14885 gatgaaatggtaagttatggtacgtgatggaacacgggaataggggcgggacatttggga 14944
Query: 539 gcgggggaaasgggggaancatcccccaacagaggaaggccgggacttgcgcctcccggc 598
| || |||| | ||| |||| ||| |||||||| ||| || || | | ||| | |
Sbjct: 14945 tctggtgaaagtgttgaattatccttcaatagaggaagtccgtgattttctcttcctgtc 15004
Query: 599 caggggggtccagggggagcggcggcgccactggaagccggggacaccattgggtttttk 658
||| || ||||| |||| ||| ||| ||||||||||| ||||| ||||||||||||||
Sbjct: 15005 cagtggtttccagtgggatcggtggctccactggaagctggggaaaccattgggtttttg 15064
Query: 659 tcctctttttakggacagakagttctagggcatggacaatacgttaccgagatgagggac 718
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 15065 tcctctttttagggacagagagttctagggcatggacaatacgttaccgagatgagggac 15124
Query: 719 atccactkttctkttctaacaaaagaagatgaaatgattatcttccggactccagctttt 778
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15125 atccactgttctgttctaacaaaagaagatgaaatgattatcttccggactccagctttt 15184
Query: 779 ccatttgccttcgcgcttgcctgtacggtcgttaccatacttacctttcttgcttcttct 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15185 ccatttgccttcgcgcttgcctgtacggtcgttaccatacttacctttcttgcttcttct 15244
Query: 839 caaaakggaatccaggtttttagcttcgtgtttctttttttttttt 884
||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 15245 caaaatggaatccaggtttttagcttcgtgtttctttttttttttt 15290
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.45 0.720 1.36
Gapped
Lambda K H
1.45 0.720 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9117
Number of Sequences: 1807
Number of extensions: 9117
Number of successful extensions: 292
Number of sequences better than 1.0e-20: 1
length of query: 884
length of database: 10,358,551
effective HSP length: 16
effective length of query: 868
effective length of database: 10,329,639
effective search space: 8966126652
effective search space used: 8966126652
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.2 bits)
S1: 11 (23.4 bits)
S2: 48 (100.6 bits)